pylimma.plot_with_highlights

pylimma.plot_with_highlights(x, y, status=None, values=None, hl_pch='o', hl_col=None, hl_cex=1.0, legend='topright', bg_pch='o', bg_col='black', bg_cex=0.3, pch=None, col=None, cex=None, xlab='', ylab='', main=None, ax=None, **kwargs)[source]

Scatterplot with colour/size highlighting for special groups of points.

Port of R limma’s plotWithHighlights (Gordon Smyth, 2014-2020). Returns the matplotlib Axes so callers can further decorate.

Parameters: