pylimma.romer

pylimma.romer(y, index, design=None, contrast=None, array_weights=None, block=None, correlation=None, set_statistic='mean', nrot=9999, shrink_resid=True, rng=None, **kwargs)

Rotation mean-rank gene-set enrichment analysis.

Port of R limma’s romer.default.

Return type:

DataFrame

Parameters:

• array_weights (ndarray | None)

• correlation (float | None)

• set_statistic (str)

• nrot (int)

• shrink_resid (bool)